001/** 002 * The contents of this file are subject to the Mozilla Public License Version 1.1 003 * (the "License"); you may not use this file except in compliance with the License. 004 * You may obtain a copy of the License at http://www.mozilla.org/MPL/ 005 * Software distributed under the License is distributed on an "AS IS" basis, 006 * WITHOUT WARRANTY OF ANY KIND, either express or implied. See the License for the 007 * specific language governing rights and limitations under the License. 008 * 009 * The Original Code is "Terser.java". Description: 010 * "Wraps a message to provide access to fields using a more terse syntax." 011 * 012 * The Initial Developer of the Original Code is University Health Network. Copyright (C) 013 * 2002. All Rights Reserved. 014 * 015 * Contributor(s): Ryan W. Gross (General Electric Corporation - Healthcare IT). 016 * 017 * Alternatively, the contents of this file may be used under the terms of the 018 * GNU General Public License (the �GPL�), in which case the provisions of the GPL are 019 * applicable instead of those above. If you wish to allow use of your version of this 020 * file only under the terms of the GPL and not to allow others to use your version 021 * of this file under the MPL, indicate your decision by deleting the provisions above 022 * and replace them with the notice and other provisions required by the GPL License. 023 * If you do not delete the provisions above, a recipient may use your version of 024 * this file under either the MPL or the GPL. 025 * 026 */ 027 028package ca.uhn.hl7v2.util; 029 030import ca.uhn.hl7v2.Location; 031import ca.uhn.hl7v2.model.*; 032import ca.uhn.hl7v2.HL7Exception; 033import java.util.StringTokenizer; 034 035import org.slf4j.Logger; 036import org.slf4j.LoggerFactory; 037 038/** 039 * <p> 040 * Wraps a message to provide access to fields using a terse location specification syntax. For 041 * example: 042 * </p> 043 * <p> 044 * <code>terser.set("MSH-9-3", "ADT_A01");</code> <br> 045 * can be used instead of <br> 046 * <code>message.getMSH().getMessageType().getMessageStructure().setValue("ADT_A01"); </code> 047 * </p> 048 * <p> 049 * The syntax of a location spec is as follows: 050 * </p> 051 * <p> 052 * location_spec: 053 * <code>segment_path_spec "-" field ["(" rep ")"] ["-" component ["-" subcomponent]] </code> 054 * </p> 055 * <p> 056 * ... where rep, field, component, and subcomponent are integers (representing, respectively, the 057 * field repetition (starting at 0), and the field number, component number, and subcomponent 058 * numbers (starting at 1). Omitting the rep is equivalent to specifying 0; omitting the component 059 * or subcomponent is equivalent to specifying 1. 060 * </p> 061 * <p> 062 * The syntax for the segment_path_spec is as follows: 063 * </p> 064 * <p> 065 * segment_path_spec: </code> ["/"] (group_spec ["(" rep ")"] "/")* segment_spec ["(" rep 066 * ")"]</code> 067 * </p> 068 * <p> 069 * ... where rep has the same meaning as for fields. 070 * </p> 071 * <p> 072 * A leading "/" indicates that navigation to the 073 * location begins at the root of the message; omitting this indicates that navigation begins at 074 * the current location of the underlying SegmentFinder (see getFinder() -- this allows manual 075 * navigation if desired). The syntax for group_spec is: 076 * </p> 077 * <p> 078 * group_spec: <code>["."] group_name_pattern</code> 079 * </p> 080 * <p> 081 * Here, a . indicates that the group should be searched for (using a SegmentFinder) starting at the 082 * current location in the message. The wildcards "*" and "?" represent any number of arbitrary 083 * characters, and a single arbitrary character, respectively. For example, "M*" and "?S?" match 084 * MSH. The first group with a name that matches the given group_name_pattern will be matched. 085 * </p> 086 * <p> 087 * The segment_spec is analogous to the group_spec. 088 * </p> 089 * <p> 090 * As another example, the following subcomponent in an SIU_S12 message: 091 * <p> 092 * <p> 093 * <code>msg.getSIU_S12_RGSAISNTEAIGNTEAILNTEAIPNTE(1).getSIU_S12_AIGNTE().getAIG().getResourceGroup(1).getIdentifier();</code> 094 * </p> 095 * </p> ... is referenced by all of the following location_spec: </p> 096 * <p> 097 * <code>/SIU_S12_RGSAISNTEAIGNTEAILNTEAIPNTE(1)/SIU_S12_AIGNTE/AIG-5(1)-1 <br> 098 * /*AIG*(1)/SIU_S12_AIGNTE/AIG-5(1)-1 <br> 099 * /*AIG*(1)/.AIG-5(1) <code> 100 * </p> 101 * <p> 102 * The search function only iterates through rep 0 of each group. Thus if rep 0 of the first group 103 * in this example was desired instead of rep 1, the following syntax would also work (since there 104 * is only one AIG segment position in SUI_S12): 105 * </p> 106 * <p> 107 * <code>/.AIG-5(1)</code> 108 * </p> 109 * 110 * @author Bryan Tripp 111 * @author Ryan W. Gross (General Electric Corporation - Healthcare IT). 112 */ 113public class Terser { 114 115 private SegmentFinder finder; 116 private static Logger log = LoggerFactory.getLogger(Terser.class); 117 118 /** Creates a new instance of Terser 119 * 120 * @param message message for which the Terser is created 121 */ 122 public Terser(Message message) { 123 if (message == null) { 124 throw new NullPointerException("Message may not be null"); 125 } 126 finder = new SegmentFinder(message); 127 } 128 129 /** 130 * Returns the string value of the Primitive at the given location. 131 * 132 * @param segment the segment from which to get the primitive 133 * @param field the field number (indexed from 1) 134 * @param rep the field repetition (indexed from 0) 135 * @param component the component number (indexed from 1, use 1 for primitive field) 136 * @param subcomponent the subcomponent number (indexed from 1, use 1 for primitive component) 137 * @return string value of the Primitive at the given location 138 * @throws HL7Exception if the primitive could not be obtained 139 */ 140 public static String get(Segment segment, int field, int rep, int component, int subcomponent) throws HL7Exception { 141 if (segment == null) { 142 throw new NullPointerException("segment may not be null"); 143 } 144 if (rep < 0) { 145 throw new IllegalArgumentException("rep must not be negative"); 146 } 147 if (component < 1) { 148 throw new IllegalArgumentException( 149 "component must not be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 150 } 151 if (subcomponent < 1) { 152 throw new IllegalArgumentException( 153 "subcomponent must not be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 154 } 155 156 Primitive prim = getPrimitive(segment, field, rep, component, subcomponent); 157 return prim.getValue(); 158 } 159 160 /** 161 * Sets the string value of the Primitive at the given location. 162 * 163 * @param segment the segment from which to get the primitive 164 * @param field the field number (indexed from 1) 165 * @param rep the field repetition (indexed from 0) 166 * @param component the component number (indexed from 1, use 1 for primitive field) 167 * @param subcomponent the subcomponent number (indexed from 1, use 1 for primitive component) 168 * @param value value to be set 169 * @throws HL7Exception if the value could not be set 170 */ 171 public static void set(Segment segment, int field, int rep, int component, int subcomponent, String value) 172 throws HL7Exception { 173 if (segment == null) { 174 throw new NullPointerException("segment may not be null"); 175 } 176 if (rep < 0) { 177 throw new IllegalArgumentException("rep must not be negative"); 178 } 179 if (component < 1) { 180 throw new IllegalArgumentException( 181 "component must be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 182 } 183 if (subcomponent < 1) { 184 throw new IllegalArgumentException( 185 "subcomponent must be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 186 } 187 188 Primitive prim = getPrimitive(segment, field, rep, component, subcomponent); 189 prim.setValue(value); 190 } 191 192 public static void set(Segment segment, Location location, String value) throws HL7Exception { 193 set(segment, 194 location.getField(), 195 location.getFieldRepetition(), 196 location.getComponent(), 197 location.getSubcomponent(), 198 value); 199 } 200 201 /** 202 * Returns the Primitive object at the given location. 203 */ 204 private static Primitive getPrimitive(Segment segment, int field, int rep, int component, int subcomponent) 205 throws HL7Exception { 206 Type type = segment.getField(field, rep); 207 return getPrimitive(type, component, subcomponent); 208 } 209 210 /** 211 * Returns the Primitive object at the given location in the given field. It is intended that 212 * the given type be at the field level, although extra components will be added blindly if, for 213 * example, you provide a primitive subcomponent instead and specify component or subcomponent > 214 * 1 215 * 216 * @param type the type from which to get the primitive 217 * @param component the component number (indexed from 1, use 1 for primitive field) 218 * @param subcomponent the subcomponent number (indexed from 1, use 1 for primitive component) 219 * @return the Primitive object at the given location 220 */ 221 public static Primitive getPrimitive(final Type type, final int component, final int subcomponent) { 222 if (type == null) { 223 throw new NullPointerException("type may not be null"); 224 } 225 if (component < 1) { 226 throw new IllegalArgumentException( 227 "component must not be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 228 } 229 if (subcomponent < 1) { 230 throw new IllegalArgumentException( 231 "subcomponent must not be 1 or more (note that this parameter is 1-indexed, not 0-indexed)"); 232 } 233 234 Type comp = getComponent(type, component); 235 if (type instanceof Varies && comp instanceof GenericPrimitive && subcomponent > 1) { 236 try { 237 final Varies varies = (Varies) type; 238 final GenericComposite comp2 = new GenericComposite(type.getMessage()); 239 varies.setData(comp2); 240 comp = getComponent(type, component); 241 } catch (final DataTypeException de) { 242 final String message = "Unexpected exception copying data to generic composite. This is probably a bug within HAPI. " 243 + de.getMessage(); 244 log.error(message, de); 245 throw new Error(message); 246 } 247 } 248 final Type sub = getComponent(comp, subcomponent); 249 return getPrimitive(sub); 250 } 251 252 /** 253 * Attempts to extract a Primitive from the given type. If it's a composite, drills down through 254 * first components until a primitive is reached. 255 */ 256 private static Primitive getPrimitive(Type type) { 257 if (type instanceof Primitive) { 258 return (Primitive) type; 259 } 260 if (type instanceof Composite) { 261 try { 262 return getPrimitive(((Composite) type).getComponent(0)); 263 } catch (HL7Exception e) { 264 throw new RuntimeException("Internal error: HL7Exception thrown on Composite.getComponent(0)."); 265 } 266 } 267 return getPrimitive(((Varies) type).getData()); 268 } 269 270 /** 271 * Returns the component (or sub-component, as the case may be) at the given index. If it does 272 * not exist, it is added as an "extra component". If comp > 1 is requested from a Varies with 273 * GenericPrimitive data, the data is set to GenericComposite (this avoids the creation of a 274 * chain of ExtraComponents on GenericPrimitives). Components are numbered from 1. 275 */ 276 private static Type getComponent(Type type, int comp) { 277 278 if (type instanceof Primitive && comp == 1) { 279 return type; 280 } 281 if (type instanceof Composite) { 282 if (comp <= numStandardComponents(type) || type instanceof GenericComposite) { 283 try { 284 return ((Composite) type).getComponent(comp - 1); 285 } catch (DataTypeException e) { 286 throw new RuntimeException( 287 "Internal error: HL7Exception thrown on getComponent(x) where x < # standard components.", 288 e); 289 } 290 } 291 } 292 if (Varies.class.isAssignableFrom(type.getClass())) { 293 Varies v = (Varies) type; 294 try { 295 if (comp > 1 && GenericPrimitive.class.isAssignableFrom(v.getData().getClass())) 296 v.setData(new GenericComposite(v.getMessage())); 297 } catch (DataTypeException e) { 298 throw new RuntimeException("Unexpected exception copying data to generic composite: " + e.getMessage(), 299 e); 300 } 301 302 return getComponent(v.getData(), comp); 303 } 304 305 return type.getExtraComponents().getComponent(comp - numStandardComponents(type) - 1); 306 } 307 308 /** 309 * <p> 310 * Gets the string value of the field specified. See the class docs for syntax of the location 311 * spec. 312 * </p> 313 * <p> 314 * If a repetition is omitted for a repeating segment or field, the first rep is used. If the 315 * component or subcomponent is not specified for a composite field, the first component is used 316 * (this allows one to write code that will work with later versions of the HL7 standard). 317 * 318 * @param spec field specification 319 * @return string value of the specified field 320 * @throws HL7Exception if the primitive could not be obtained 321 */ 322 public String get(String spec) throws HL7Exception { 323 StringTokenizer tok = new StringTokenizer(spec, "-", false); 324 Segment segment = getSegment(tok.nextToken()); 325 326 int[] ind = getIndices(spec); 327 return get(segment, ind[0], ind[1], ind[2], ind[3]); 328 } 329 330 /** 331 * Returns the segment specified in the given segment_path_spec. 332 * 333 * @param segSpec segment specification 334 * @return the segment specified 335 * @throws HL7Exception if the segment could not be obtained 336 */ 337 public Segment getSegment(String segSpec) throws HL7Exception { 338 Segment seg = null; 339 340 if (segSpec.startsWith("/")) { 341 getFinder().reset(); 342 } 343 344 StringTokenizer tok = new StringTokenizer(segSpec, "/", false); 345 SegmentFinder finder = getFinder(); 346 while (tok.hasMoreTokens()) { 347 String pathSpec = tok.nextToken(); 348 Terser.PathSpec ps = parsePathSpec(pathSpec); 349 ps.isGroup = tok.hasMoreTokens(); 350 if (ps.isGroup) { 351 Group g = ps.find ? 352 finder.findGroup(ps.pattern, ps.rep) : 353 finder.getGroup(ps.pattern, ps.rep); 354 finder = new SegmentFinder(g); 355 } else { 356 seg = ps.find ? 357 finder.findSegment(ps.pattern, ps.rep) : 358 finder.getSegment(ps.pattern, ps.rep); 359 } 360 } 361 362 return seg; 363 } 364 365 /** Gets path information from a path spec. */ 366 private PathSpec parsePathSpec(String spec) throws HL7Exception { 367 PathSpec ps = new PathSpec(); 368 369 if (spec.startsWith(".")) { 370 ps.find = true; 371 spec = spec.substring(1); 372 } else { 373 ps.find = false; 374 } 375 376 if (spec.length() == 0) { 377 throw new HL7Exception("Invalid path (some path element is either empty or contains only a dot)"); 378 } 379 StringTokenizer tok = new StringTokenizer(spec, "()", false); 380 ps.pattern = tok.nextToken(); 381 if (tok.hasMoreTokens()) { 382 String repString = tok.nextToken(); 383 try { 384 ps.rep = Integer.parseInt(repString); 385 } catch (NumberFormatException e) { 386 throw new HL7Exception(repString + " is not a valid rep #"); 387 } 388 } else { 389 ps.rep = 0; 390 } 391 return ps; 392 } 393 394 /** 395 * Given a Terser path, returns an array containing field num, field rep, component, and 396 * subcomponent. 397 * 398 * @param spec field specification 399 * @return an array containing field num, field rep, component, and subcomponent 400 * @throws HL7Exception if the field does not exist 401 */ 402 public static int[] getIndices(String spec) throws HL7Exception { 403 StringTokenizer tok = new StringTokenizer(spec, "-", false); 404 tok.nextToken(); // skip over segment 405 if (!tok.hasMoreTokens()) 406 throw new HL7Exception("Must specify field in spec " + spec); 407 try { 408 StringTokenizer fieldSpec = new StringTokenizer(tok.nextToken(), "()", false); 409 int fieldNum = Integer.parseInt(fieldSpec.nextToken()); 410 int fieldRep = fieldSpec.hasMoreTokens() ? 411 Integer.parseInt(fieldSpec.nextToken()) : 0; 412 int component = tok.hasMoreTokens() ? 413 Integer.parseInt(tok.nextToken()) : 1; 414 int subcomponent = tok.hasMoreTokens() ? 415 Integer.parseInt(tok.nextToken()) : 1; 416 return new int[] { fieldNum, fieldRep, component, subcomponent }; 417 } catch (NumberFormatException e) { 418 throw new HL7Exception("Invalid integer in spec " + spec); 419 } 420 } 421 422 423 /** 424 * Sets the string value of the field specified. See class docs for location spec syntax. 425 * 426 * @param spec primitive path specification 427 * @param value value to be set 428 * @throws HL7Exception if the primitive does not exist 429 */ 430 public void set(String spec, String value) throws HL7Exception { 431 StringTokenizer tok = new StringTokenizer(spec, "-", false); 432 Segment segment = getSegment(tok.nextToken()); 433 434 int[] ind = getIndices(spec); 435 log.trace("Setting {} seg: {} ind: {} {} {} {}", new Object[] { spec, segment.getName(), ind[0], ind[1], 436 ind[2], ind[3] }); 437 set(segment, ind[0], ind[1], ind[2], ind[3], value); 438 } 439 440 /** 441 * Returns the number of sub-components in the specified component, i.e. the number of standard 442 * sub-components (e.g. 6 for CE) plus any extra components that that have been added at 443 * runtime. 444 * 445 * @param type composite type 446 * @param component numbered from 1 447 * @return number of sub-components in the specified component 448 */ 449 public static int numSubComponents(Type type, int component) { 450 if (component == 1 && Primitive.class.isAssignableFrom(type.getClass())) { 451 // note that getComponent(primitive, 1) below returns the primitive 452 // itself -- if we do numComponents on it, we'll end up with the 453 // number of components in the field, not the number of subcomponents 454 return 1; 455 } 456 Type comp = getComponent(type, component); 457 return numComponents(comp); 458 } 459 460 /** 461 * Returns the number of components in the given type, i.e. the number of standard components 462 * (e.g. 6 for CE) plus any extra components that have been added at runtime. 463 * 464 * @param t composite type 465 * @return the number of components in the given type 466 */ 467 public static int numComponents(Type t) { 468 if (!(t instanceof Varies)) { 469 return numStandardComponents(t) + t.getExtraComponents().numComponents(); 470 } 471 return numComponents(((Varies) t).getData()); 472 } 473 474 private static int numStandardComponents(Type t) { 475 if (t instanceof Composite) { 476 return ((Composite) t).getComponents().length; 477 } 478 if (t instanceof Varies) { 479 return numStandardComponents(((Varies) t).getData()); 480 } 481 return 1; 482 } 483 484 /** 485 * Returns the segment finder used by this Terser. Navigating the finder will influence the 486 * behaviour of the Terser accordingly. Ie when the full path of the segment is not specified 487 * the segment will be sought beginning at the current location of the finder. 488 * 489 * @return the segment finder used by this Terser 490 */ 491 public SegmentFinder getFinder() { 492 return finder; 493 } 494 495 /** Struct for information about a step in a segment path. */ 496 private static class PathSpec { 497 public String pattern; 498 public boolean isGroup; 499 public boolean find; 500 public int rep; 501 } 502}